Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911148.1_cds_XP_016461152.1_54498
CDS Infomation

[gene=LOC107784520] [db_xref=GeneID:107784520] [protein=subtilisin-like protease SBT1.6 isoform X3] [protein_id=XP_016461152.1] [location=complement(join(4811..5373,5451..5640,5891..6005,6084..6326,6425..6519,6599..7127,7202..7313,7917..8073))] [gbkey=CDS]
Sequence

ATGCCTGGAGTGGTATCCGTGTTTCCAAATACTAAGAGGAGCCTACACACAACTCATTCA
TGGGATTTTATGGGGCTCAGTGATGATGAAACAATGGAAATTCCAGGTTTTTCTACCAAG
AACCAAATTAATGTAATCATTGGTTTCATTGATACAGGAATTTGGCCTGAGTCTCCAAGT
TTTAGTGATACCAACATGCCTCCAGTGCCAGCTGGATGGAAAGGACAATGCCAATCAGGA
GAAGCATTCAATGCCTCTATATGCAACAGGAAAATAATTGGGGCAAGATATTATATGAGT
GGCTATGAAGCTGAAGAAGAAAATGGGAAGACCATGTTTTACAAGTCTGCTAGGGACAGT
TCTGGTCATGGGAGTCACACAGCTTCAACAGCAGCGGGGCGTTACGTAGCTAATATGAAT
TACAAAGGTTTGGCAAATGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTG
TATAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTATTGGCTGCATTTGATGAT
GCAATTAGAGATGGGGTTCATGTCATTTCTCTATCTTTGGGCCCTGATGCTCCCCAAGGA
GATTATTTCAATGATGCCATTTCTGTGGGGTCATATCATGCTGTTAGCCGCGGAATACTT
GTGGTGGCTTCAGTTGGAAATGAAGGCAGCACTGGTTCAGCCACAAATTTAGCTCCTTGG
ATGATCACAGTTGCAGCCAGTTCAACTGATAGAGATTTTACTTCTGATATTTTACTAGGA
AATGGAGTTCGGCTCAAGGGTGAAAGTCTTAGCTTATCTCAAATGAATACATCTACAAGA
ATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCCTATCAATCCAGTTATTGC
TTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTGCTTGTGTGCCTACATGCT
GGAAGCTCAAGTGAGTCAAAGATGGAGAAAAGCATTATAGTTAAAGAAGCCGGTGGAGTT
GGGATGATCCTTATAGATGACGCAGACAAGGGTGTGGCCATCCCTTTTGTCATTCCTGCA
GCAACTGTTGGGAAAAAGATTGGAAACAAGATCCTAGCTTACATTAACAATACACGCCTC
CCCATGGCAAGGATTCTCTCTGCTAGAACCGTTTTGGGAGCTCAACCTGCTCCTCGAGTA
GCAGCATTTTCTTCAAGAGGTCCTAATTCTGTAACACCAGAAATTTTGAAGCCTGATATT
GCAGCTCCTGGATTAAATATCCTGGCAGCATGGTCTCCAGCAGCTTCTACTAAGTTGAAC
TTCAATGTACTATCCGGAACTTCTATGGCTTGCCCCCACATAACAGGAGTTGTTGCCTTG
TTAAAAGCTGTGCATCCATCTTGGTCTCCCTCTGCAATTAAATCCGCGATCATGACGACA
GCTAAACTGTCAGATAAGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAGAGCT
ACTCCATTTGATTTTGGTTCTGGCTTTGTTAACCCTACGAATGTCCTGGATCCTGGTCTT
ATATACGATGCACAGCCAGCAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGATGAG
AAATCTCTGCATCTGATTACAAGGGACAATAGCACCTGTGATCAAACCTTTGCATCACCA
AATGGACTAAATTATCCCTCCATCACAATACCAAACCTCAGAAGCACATATTCAGTAACT
CGAACTGTTACTAACGTGGGAAAAGCAAGAAGCATTTACAAGGCAGTTGTCTATGCACCT
ACGGGTGTCAATGTCACTGTGGTTCCCCGAAGATTAGCCTTCACTAGATATTACCAGAAG
ATGAATTTTACAGTGAACTTCAAGGTGGCTGCACCAACACAGGGATATGTATTTGGTTCT
TTGACATGGAGGAACAAAAGAACATCGGTAACATCTCCACTTGTTGTCAGAGTGGCACAT
TCCAACATGGGTATGATGGTATAG

Peptide Sequence

PEP ID

XP_016461152.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT1.6 isoform X3 [Nicotiana tabacum]
Sequence

MPGVVSVFPNTKRSLHTTHSWDFMGLSDDETMEIPGFSTKNQINVIIGFIDTGIWPESPS
FSDTNMPPVPAGWKGQCQSGEAFNASICNRKIIGARYYMSGYEAEEENGKTMFYKSARDS
SGHGSHTASTAAGRYVANMNYKGLANGGARGGAPMARIAVYKTCWSSGCYDVDLLAAFDD
AIRDGVHVISLSLGPDAPQGDYFNDAISVGSYHAVSRGILVVASVGNEGSTGSATNLAPW
MITVAASSTDRDFTSDILLGNGVRLKGESLSLSQMNTSTRIIPASEAYAGYFTPYQSSYC
LDSSLNRTKAKGKVLVCLHAGSSSESKMEKSIIVKEAGGVGMILIDDADKGVAIPFVIPA
ATVGKKIGNKILAYINNTRLPMARILSARTVLGAQPAPRVAAFSSRGPNSVTPEILKPDI
AAPGLNILAAWSPAASTKLNFNVLSGTSMACPHITGVVALLKAVHPSWSPSAIKSAIMTT
AKLSDKHHKPIIVDPEGKRATPFDFGSGFVNPTNVLDPGLIYDAQPADYRAFLCSIGYDE
KSLHLITRDNSTCDQTFASPNGLNYPSITIPNLRSTYSVTRTVTNVGKARSIYKAVVYAP
TGVNVTVVPRRLAFTRYYQKMNFTVNFKVAAPTQGYVFGSLTWRNKRTSVTSPLVVRVAH
SNMGMMV

Transcript Sequence

Gene sequence data has not been registered.